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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922638.1_cds_XP_016471420.1_63764
CDS Infomation

[gene=LOC107793556] [db_xref=GeneID:107793556] [protein=probable 2-oxoglutarate-dependent dioxygenase At3g49630] [protein_id=XP_016471420.1] [location=join(39184..39217,39375..39490,39727..39845,39925..39988,40954..41021,41206..41264,41379..41544,41703..41722,41804..41850,42040..42120,42245..42334,42435..42563)] [gbkey=CDS]
Sequence

ATGGCAACAGATTTCAAGTCTATCCCAATAATAGATATAAGTCCTCTTTTAGAGAAGTGG
GATCATCCAAATTTGGCTCATGACGAAGGTGTAGCTCAAGTTGTTAGACAATTGGGTCAG
GCTTGTAGAGAAGCTGGATTCTTTTATGTGAAGGGCCATGGTATCCCTATTTCCCTTATG
AAAGAGATTAGAAGCATTACACGCGAATATTTTCATCAACCCTATGAGGAGAAACTCAAA
ATCAAACTTTCTGCAGCAACTGGATACAGAGGATATCAAAGAATCGGAGAGAATATAACC
AAAGGCATACCTGATATACATGAAGCTATTGATTGCTATAGAGAAGTGAAACATGGGATG
TATGGAAATCTTGGAAAAGCTATGCAAGGATCCAACATATGGCCAAGTAACCCTCCAAAT
TTCAAGCAGTTAATGGAGGAGTATGTTGACCGTTGCACAGATCTATCACGAAAGATAATG
AGGGGAATTGCTCTGGCATTGGGTGGATCAGCGGATGAAATGGAGGGTGAAGTAGGTGGT
GATCCATTTTGGGTCTTGCGAATAATTGGCTACCCTGCTGTGTCCATTTCAAATGGACAT
GATAAGGCTGACAATGATGTTGGATGTGGCGCCCATACAGATTATGGGCTATTAACATTA
GTCAACCAAGATGACGACATAGTTGCCCTTCAGGTGAGAAACAAATCGGGCGAGTGGATA
TCAGCACCACCTATCCCAGGCACATTTGTGTGTAATATAGGAGATATGTTGAAGATCCTA
TCAAACGGAATTTATGAATCAACATTGCACCGGGTCATCAATAACTCTCCCAAATATCGT
GTTTGCGTGGCCTACTTTTATGAGCCAAACTTTGATGCTGCAATAGAGCCGCTAGATGTG
TGTTCACAGAAGACTGGTGGCACCAAGAATTTTGAAGGAGCTGTTTACGGAAAGCATTTG
GTCAGCAAAGTCACCACCAATTTTGTGATGTAG

Peptide Sequence

PEP ID

XP_016471420.1
PEP Infomation

PREDICTED: probable 2-oxoglutarate-dependent dioxygenase At3g49630 [Nicotiana tabacum]
Sequence

MATDFKSIPIIDISPLLEKWDHPNLAHDEGVAQVVRQLGQACREAGFFYVKGHGIPISLM
KEIRSITREYFHQPYEEKLKIKLSAATGYRGYQRIGENITKGIPDIHEAIDCYREVKHGM
YGNLGKAMQGSNIWPSNPPNFKQLMEEYVDRCTDLSRKIMRGIALALGGSADEMEGEVGG
DPFWVLRIIGYPAVSISNGHDKADNDVGCGAHTDYGLLTLVNQDDDIVALQVRNKSGEWI
SAPPIPGTFVCNIGDMLKILSNGIYESTLHRVINNSPKYRVCVAYFYEPNFDAAIEPLDV
CSQKTGGTKNFEGAVYGKHLVSKVTTNFVM

Transcript Sequence

Gene sequence data has not been registered.